STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57724.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU2676 hypothetical protein. (302 aa)    
Predicted Functional Partners:
ADE57725.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_3447 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
  
   0.771
ADE57722.1
Dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein; KEGG: nmu:Nmul_A2092 hypothetical protein.
 
   
 0.616
ADE57723.1
KEGG: sat:SYN_00429 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
       0.522
ADE57726.1
PFAM: Rubrerythrin; KEGG: atc:AGR_C_430 hypothetical protein.
       0.517
ADE57915.1
Hypothetical protein.
 
  
 0.470
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.