STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57792.1KEGG: hsm:HSM_1915 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria. (333 aa)    
Predicted Functional Partners:
ADE57790.1
KEGG: plu:plu0174 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.918
ADE56238.1
KEGG: tmz:Tmz1t_0543 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter.
  
 0.856
ADE57862.1
KEGG: dps:DP3053 DctMQ fusion protein (C4- dicarboxylate transporter); TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter.
  
 0.845
ADE57992.1
KEGG: dvm:DvMF_2137 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.844
ADE57702.1
KEGG: dat:HRM2_45580 DctM10; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.838
ADE57424.1
KEGG: dps:DP3053 DctMQ fusion protein (C4- dicarboxylate transporter); TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.837
ADE56280.1
TRAP dicarboxylate transporter, DctM subunit; KEGG: pau:PA14_68290 C4-dicarboxylate transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.821
ADE57943.1
KEGG: tmz:Tmz1t_0543 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.817
ADE57425.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sfu:Sfum_3144 tripartite ATP-independent periplasmic transporter DctQ.
 
  
 0.809
ADE56237.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dal:Dalk_0472 tripartite ATP-independent periplasmic transporter DctQ component.
 
  
 0.806
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.