STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57943.1KEGG: tmz:Tmz1t_0543 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (428 aa)    
Predicted Functional Partners:
ADE57945.1
TRAP dicarboxylate transporter, DctP subunit; KEGG: sme:SM_b20036 putative ABC transporter periplasmic solute-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
 0.882
ADE57944.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vfm:VFMJ11_A0038 trap-type C4-dicarboxylate transport system, small permease component.
  
 
 0.838
ADE57792.1
KEGG: hsm:HSM_1915 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
 0.817
ADE57990.1
KEGG: pmu:PM1252 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
 0.772
ADE56278.1
TRAP dicarboxylate transporter, DctP subunit; KEGG: bmj:BMULJ_05545 PTRAP-type C4-dicarboxylate transport system periplasmic component; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
 0.755
ADE57426.1
KEGG: mmw:Mmwyl1_2293 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
 0.753
ADE57864.1
KEGG: csa:Csal_1747 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
  
 0.731
ADE56363.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dde:Dde_1275 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.722
ADE56354.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dde:Dde_1275 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.716
ADE57439.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: mmw:Mmwyl1_1471 TRAP dicarboxylate transporter-DctP subunit.
 
  
 0.708
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.