STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE58023.1KEGG: pin:Ping_1307 antifreeze protein type I. (414 aa)    
Predicted Functional Partners:
ADE58022.1
Hypothetical protein.
       0.744
ADE58024.1
PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_0095 major facilitator superfamily MFS_1.
 
     0.700
ADE58021.1
KEGG: sbl:Sbal_0630 hypothetical protein.
       0.672
ADE58025.1
Phosphohydrolase (DHH superfamily)-like protein; KEGG: cjd:JJD26997_1026 hypothetical protein.
       0.551
ADE57568.1
Hypothetical protein.
  
  
 0.547
ADE58020.1
KEGG: sat:SYN_01071 cysteine desulfurase / selenocysteine lyase; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V.
       0.482
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.