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JG24_28295 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_28295" - L-seryl-tRNA(Sec) selenium transferase-related protein in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
JG24_28295L-seryl-tRNA(Sec) selenium transferase-related protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)    
Predicted Functional Partners:
JG24_28300
Putative periplasmic protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
        0.993
JG24_28290
Metallo-dependent hydrolases, subgroup B; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
  0.993
JG24_09230
Catalyzes the formation of selenophosphate from selenide and ATP; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
 
   
  0.935
serS
Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (430 aa)
     
 
  0.920
JG24_28285
Putative inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
 
        0.913
JG24_28280
Putative inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
        0.905
JG24_28270
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (120 aa)
 
        0.896
JG24_28275
Putative cytoplasmic protein; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
 
        0.896
JG24_28265
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
 
          0.892
JG24_28310
Putative BglB-family transcriptional antiterminator; Derived by automated computational analysis using gene prediction method- Protein Homology (636 aa)
 
        0.881
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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