STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL40130.1Transcriptional regulator, GntR family. (232 aa)    
Predicted Functional Partners:
SEK66701.1
Transcriptional regulator, GntR family.
  
     0.771
SEK70311.1
Transcriptional regulator, GntR family.
  
     0.771
SEK77280.1
Transcriptional regulator, GntR family.
  
     0.771
SEK76621.1
Transcriptional regulator, GntR family.
  
     0.770
SEK26561.1
Transcriptional regulator, GntR family.
  
     0.763
SEK38160.1
Transcriptional regulator, GntR family.
  
     0.763
SEL17826.1
Transcriptional regulator, GntR family.
  
     0.758
SEK76360.1
DNA-binding transcriptional regulator, GntR family.
  
     0.683
SEL40013.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
       0.466
SEL40042.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
       0.466
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.