STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK33381.1Benzoate/toluate 1,2-dioxygenase beta subunit. (176 aa)    
Predicted Functional Partners:
SEK33399.1
Benzoate 1,2-dioxygenase, alpha subunit.
 
 0.999
SEK33347.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 
 0.990
SEK58711.1
Phenylpropionate dioxygenase, large terminal subunit.
 
 0.985
SEK58929.1
Rieske 2Fe-2S family protein.
 
 0.985
SEK33318.1
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.980
SEK46040.1
Vanillate O-demethylase monooxygenase subunit.
 
 0.980
SEK93985.1
Phenylpropionate dioxygenase, large terminal subunit.
 
 0.980
SEK33424.1
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.927
SEL12956.1
Ferredoxin-NADP reductase.
  
 
 0.869
SEK33561.1
Catechol 1,2-dioxygenase.
 
  
 0.858
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.