STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK35834.1Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (377 aa)    
Predicted Functional Partners:
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.824
glsA
L-glutaminase; Belongs to the glutaminase family.
   
 
  0.788
SEL24751.1
GMP synthase (glutamine-hydrolysing).
 
     0.698
SEK60965.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
    
 0.686
SEK77252.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
    
 0.686
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
     
 0.671
SEL19046.1
Cystathionine gamma-synthase.
     
 0.671
SEK35801.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
  
 
  0.632
SEK35853.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
       0.582
SEK32231.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
    
 0.576
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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