Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK37227.1 | SEK37289.1 | SAMN05216208_0461 | SAMN05216208_0463 | Magnesium and cobalt transporter. | Phosphate starvation-inducible protein PhoH. | 0.785 |
SEK37227.1 | SEK37309.1 | SAMN05216208_0461 | SAMN05216208_0464 | Magnesium and cobalt transporter. | Hypothetical protein. | 0.484 |
SEK37227.1 | lnt | SAMN05216208_0461 | SAMN05216208_0460 | Magnesium and cobalt transporter. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.768 |
SEK37227.1 | metK | SAMN05216208_0461 | SAMN05216208_0459 | Magnesium and cobalt transporter. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.704 |
SEK37227.1 | miaB | SAMN05216208_0461 | SAMN05216208_0466 | Magnesium and cobalt transporter. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.478 |
SEK37227.1 | trmB | SAMN05216208_0461 | SAMN05216208_0458 | Magnesium and cobalt transporter. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.632 |
SEK37227.1 | ybeY | SAMN05216208_0461 | SAMN05216208_0462 | Magnesium and cobalt transporter. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.855 |
SEK37289.1 | SEK37227.1 | SAMN05216208_0463 | SAMN05216208_0461 | Phosphate starvation-inducible protein PhoH. | Magnesium and cobalt transporter. | 0.785 |
SEK37289.1 | SEK37309.1 | SAMN05216208_0463 | SAMN05216208_0464 | Phosphate starvation-inducible protein PhoH. | Hypothetical protein. | 0.649 |
SEK37289.1 | cmk | SAMN05216208_0463 | SAMN05216208_3055 | Phosphate starvation-inducible protein PhoH. | Cytidylate kinase. | 0.561 |
SEK37289.1 | lnt | SAMN05216208_0463 | SAMN05216208_0460 | Phosphate starvation-inducible protein PhoH. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.663 |
SEK37289.1 | metK | SAMN05216208_0463 | SAMN05216208_0459 | Phosphate starvation-inducible protein PhoH. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.563 |
SEK37289.1 | miaB | SAMN05216208_0463 | SAMN05216208_0466 | Phosphate starvation-inducible protein PhoH. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.556 |
SEK37289.1 | recO | SAMN05216208_0463 | SAMN05216208_0705 | Phosphate starvation-inducible protein PhoH. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.864 |
SEK37289.1 | tadA | SAMN05216208_0463 | SAMN05216208_0442 | Phosphate starvation-inducible protein PhoH. | tRNA(Arg) A34 adenosine deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.553 |
SEK37289.1 | trmB | SAMN05216208_0463 | SAMN05216208_0458 | Phosphate starvation-inducible protein PhoH. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.674 |
SEK37289.1 | ybeY | SAMN05216208_0463 | SAMN05216208_0462 | Phosphate starvation-inducible protein PhoH. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.990 |
SEK37309.1 | SEK37227.1 | SAMN05216208_0464 | SAMN05216208_0461 | Hypothetical protein. | Magnesium and cobalt transporter. | 0.484 |
SEK37309.1 | SEK37289.1 | SAMN05216208_0464 | SAMN05216208_0463 | Hypothetical protein. | Phosphate starvation-inducible protein PhoH. | 0.649 |
SEK37309.1 | miaB | SAMN05216208_0464 | SAMN05216208_0466 | Hypothetical protein. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.616 |
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