Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK32231.1 | SEK38994.1 | SAMN05216208_0282 | SAMN05216208_0530 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Aminopeptidase N. | 0.856 |
SEK32231.1 | SEK54079.1 | SAMN05216208_0282 | SAMN05216208_1076 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.858 |
SEK32231.1 | SEK60965.1 | SAMN05216208_0282 | SAMN05216208_1354 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03. | 0.817 |
SEK32231.1 | gshB | SAMN05216208_0282 | SAMN05216208_1534 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.864 |
SEK32231.1 | pepA | SAMN05216208_0282 | SAMN05216208_0251 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.858 |
SEK38994.1 | SEK32231.1 | SAMN05216208_0530 | SAMN05216208_0282 | Aminopeptidase N. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.856 |
SEK38994.1 | SEK54079.1 | SAMN05216208_0530 | SAMN05216208_1076 | Aminopeptidase N. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.937 |
SEK38994.1 | SEK60965.1 | SAMN05216208_0530 | SAMN05216208_1354 | Aminopeptidase N. | Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03. | 0.903 |
SEK38994.1 | SEL14043.1 | SAMN05216208_0530 | SAMN05216208_2865 | Aminopeptidase N. | Aromatic amino acid aminotransferase apoenzyme. | 0.874 |
SEK38994.1 | SEL19046.1 | SAMN05216208_0530 | SAMN05216208_3057 | Aminopeptidase N. | Cystathionine gamma-synthase. | 0.739 |
SEK38994.1 | SEL31411.1 | SAMN05216208_0530 | SAMN05216208_3413 | Aminopeptidase N. | Cysteine synthase A. | 0.831 |
SEK38994.1 | glyA | SAMN05216208_0530 | SAMN05216208_0948 | Aminopeptidase N. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.858 |
SEK38994.1 | gshB | SAMN05216208_0530 | SAMN05216208_1534 | Aminopeptidase N. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.911 |
SEK38994.1 | metZ | SAMN05216208_0530 | SAMN05216208_2027 | Aminopeptidase N. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.737 |
SEK38994.1 | pepA | SAMN05216208_0530 | SAMN05216208_0251 | Aminopeptidase N. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.926 |
SEK54079.1 | SEK32231.1 | SAMN05216208_1076 | SAMN05216208_0282 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.858 |
SEK54079.1 | SEK38994.1 | SAMN05216208_1076 | SAMN05216208_0530 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aminopeptidase N. | 0.937 |
SEK54079.1 | SEK60965.1 | SAMN05216208_1076 | SAMN05216208_1354 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03. | 0.905 |
SEK54079.1 | SEL14043.1 | SAMN05216208_1076 | SAMN05216208_2865 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aromatic amino acid aminotransferase apoenzyme. | 0.835 |
SEK54079.1 | SEL31411.1 | SAMN05216208_1076 | SAMN05216208_3413 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Cysteine synthase A. | 0.825 |
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