STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK39840.1Phosphoglycerol transferase MdoB. (559 aa)    
Predicted Functional Partners:
SEK39876.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     0.987
SEK39809.1
Uncharacterized membrane protein YbhN, UPF0104 family.
 
  
 0.963
SEK39906.1
Cytochrome b561.
 
     0.857
SEK39598.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.849
SEK39755.1
Methyltransferase domain-containing protein.
  
  
 0.798
SEK39732.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.762
SEK39708.1
Hypothetical protein.
 
     0.741
SEK39653.1
Methyltransferase, FkbM family.
 
     0.723
SEK39928.1
Membrane glycosyltransferase.
 
   
 0.583
SEK39948.1
Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
   
 0.539
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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