Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK36032.1 | SEK40375.1 | SAMN05216208_0422 | SAMN05216208_0583 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.414 |
SEK40353.1 | SEK40375.1 | SAMN05216208_0582 | SAMN05216208_0583 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.572 |
SEK40353.1 | SEK40401.1 | SAMN05216208_0582 | SAMN05216208_0584 | Pimeloyl-ACP methyl ester carboxylesterase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.671 |
SEK40353.1 | SEK40429.1 | SAMN05216208_0582 | SAMN05216208_0585 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.511 |
SEK40353.1 | thrS | SAMN05216208_0582 | SAMN05216208_0586 | Pimeloyl-ACP methyl ester carboxylesterase. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.401 |
SEK40375.1 | SEK36032.1 | SAMN05216208_0583 | SAMN05216208_0422 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.414 |
SEK40375.1 | SEK40353.1 | SAMN05216208_0583 | SAMN05216208_0582 | Hypothetical protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.572 |
SEK40375.1 | SEK40401.1 | SAMN05216208_0583 | SAMN05216208_0584 | Hypothetical protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.801 |
SEK40375.1 | SEK40429.1 | SAMN05216208_0583 | SAMN05216208_0585 | Hypothetical protein. | Hypothetical protein. | 0.732 |
SEK40375.1 | SEK56743.1 | SAMN05216208_0583 | SAMN05216208_1183 | Hypothetical protein. | SnoaL-like domain-containing protein. | 0.411 |
SEK40375.1 | SEL18796.1 | SAMN05216208_0583 | SAMN05216208_3047 | Hypothetical protein. | Hypothetical protein. | 0.404 |
SEK40375.1 | thrS | SAMN05216208_0583 | SAMN05216208_0586 | Hypothetical protein. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.486 |
SEK40401.1 | SEK40353.1 | SAMN05216208_0584 | SAMN05216208_0582 | Pimeloyl-ACP methyl ester carboxylesterase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.671 |
SEK40401.1 | SEK40375.1 | SAMN05216208_0584 | SAMN05216208_0583 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.801 |
SEK40401.1 | SEK40429.1 | SAMN05216208_0584 | SAMN05216208_0585 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.783 |
SEK40401.1 | thrS | SAMN05216208_0584 | SAMN05216208_0586 | Pimeloyl-ACP methyl ester carboxylesterase. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.695 |
SEK40429.1 | SEK40353.1 | SAMN05216208_0585 | SAMN05216208_0582 | Hypothetical protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.511 |
SEK40429.1 | SEK40375.1 | SAMN05216208_0585 | SAMN05216208_0583 | Hypothetical protein. | Hypothetical protein. | 0.732 |
SEK40429.1 | SEK40401.1 | SAMN05216208_0585 | SAMN05216208_0584 | Hypothetical protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.783 |
SEK40429.1 | thrS | SAMN05216208_0585 | SAMN05216208_0586 | Hypothetical protein. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.523 |
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