STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK40401.1Pimeloyl-ACP methyl ester carboxylesterase. (258 aa)    
Predicted Functional Partners:
SEK40375.1
Hypothetical protein.
       0.801
SEK40429.1
Hypothetical protein.
       0.783
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.695
SEK74525.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.678
SEK40353.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.671
SEK91703.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.575
SEK59234.1
Putative redox protein.
  
  
0.555
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.500
SEK46998.1
Glyoxalase family protein.
  
 
 0.487
SEL17110.1
Sulfotransferase domain-containing protein.
  
 
   0.486
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.