STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK43344.1Electron transfer flavoprotein beta subunit. (252 aa)    
Predicted Functional Partners:
SEK43376.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
SEL16259.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
SEK67442.1
2,4-dienoyl-CoA reductase.
 
 
 0.989
SEK46152.1
butyryl-CoA dehydrogenase.
 
 
 0.976
SEK26985.1
glutaryl-CoA dehydrogenase.
 
 
 0.971
SEL10937.1
acyl-CoA dehydrogenase.
 
 
 0.969
SEL16479.1
Acyl-CoA dehydrogenase.
 
 
 0.962
SEK43609.1
(2S)-methylsuccinyl-CoA dehydrogenase.
 
 
 0.960
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.960
SEK58679.1
Citrate/tricarballylate utilization protein.
   
 
 0.957
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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