STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK45232.1Phosphocarrier protein. (92 aa)    
Predicted Functional Partners:
SEK45249.1
PTS system, mannose-specific IIA component.
 
 
 0.999
SEK50026.1
Phosphotransferase system, enzyme I, PtsP; Belongs to the PEP-utilizing enzyme family.
  
 
 0.992
SEL36690.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
 
 
 0.958
SEK77644.1
Transcriptional regulator, LacI family.
   
 
 0.952
SEK45310.1
Hpr(Ser) kinase/phosphatase.
 
 
 
 0.945
SEK79670.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
 
 0.919
SEK45283.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
  
  
 0.903
rpsG
SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
   
    0.832
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.820
SEK45337.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
       0.813
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.