Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK45689.1 | SEK45721.1 | SAMN05216208_0774 | SAMN05216208_0775 | Magnesium transporter; Acts as a magnesium transporter. | Uncharacterized membrane protein. | 0.741 |
SEK45689.1 | SEK45753.1 | SAMN05216208_0774 | SAMN05216208_0776 | Magnesium transporter; Acts as a magnesium transporter. | Membrane bound FAD containing D-sorbitol dehydrogenase. | 0.444 |
SEK45721.1 | SEK45689.1 | SAMN05216208_0775 | SAMN05216208_0774 | Uncharacterized membrane protein. | Magnesium transporter; Acts as a magnesium transporter. | 0.741 |
SEK45721.1 | SEK45753.1 | SAMN05216208_0775 | SAMN05216208_0776 | Uncharacterized membrane protein. | Membrane bound FAD containing D-sorbitol dehydrogenase. | 0.491 |
SEK45721.1 | SEK45777.1 | SAMN05216208_0775 | SAMN05216208_0777 | Uncharacterized membrane protein. | Choline dehydrogenase. | 0.402 |
SEK45753.1 | SEK45689.1 | SAMN05216208_0776 | SAMN05216208_0774 | Membrane bound FAD containing D-sorbitol dehydrogenase. | Magnesium transporter; Acts as a magnesium transporter. | 0.444 |
SEK45753.1 | SEK45721.1 | SAMN05216208_0776 | SAMN05216208_0775 | Membrane bound FAD containing D-sorbitol dehydrogenase. | Uncharacterized membrane protein. | 0.491 |
SEK45753.1 | SEK45777.1 | SAMN05216208_0776 | SAMN05216208_0777 | Membrane bound FAD containing D-sorbitol dehydrogenase. | Choline dehydrogenase. | 0.628 |
SEK45777.1 | SEK45721.1 | SAMN05216208_0777 | SAMN05216208_0775 | Choline dehydrogenase. | Uncharacterized membrane protein. | 0.402 |
SEK45777.1 | SEK45753.1 | SAMN05216208_0777 | SAMN05216208_0776 | Choline dehydrogenase. | Membrane bound FAD containing D-sorbitol dehydrogenase. | 0.628 |