STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK47067.1Phospholipase/carboxylesterase. (235 aa)    
Predicted Functional Partners:
SEK47109.1
Hypothetical protein.
 
    0.803
SEL35018.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
     
 0.798
SEK46998.1
Glyoxalase family protein.
 
  
 0.789
SEK47159.1
Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
    
  0.708
SEK47134.1
Hypothetical protein; Belongs to the pirin family.
       0.654
SEK76967.1
DNA-3-methyladenine glycosylase II.
     
 0.539
SEK77017.1
Predicted arabinose efflux permease, MFS family.
     
 0.539
SEK47046.1
Nicotinamidase-related amidase.
  
    0.454
SEK33930.1
Cu(I)-responsive transcriptional regulator.
      
 0.406
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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