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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK47480.1Creatinine amidohydrolase. (267 aa)    
Predicted Functional Partners:
SEK47537.1
Creatinase.
 
  
  0.898
SEK32765.1
Cytosine deaminase.
 
  
  0.849
SEK47442.1
Spermidine/putrescine transport system substrate-binding protein.
 
     0.741
SEK47508.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.634
SEL18740.1
Creatinase.
  
  
  0.605
SEK47367.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.604
SEK47410.1
Spermidine/putrescine transport system permease protein/putrescine transport system permease protein.
 
     0.567
SEK47391.1
Spermidine/putrescine transport system permease protein.
 
     0.561
SEK66676.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
  
 0.494
SEK91829.1
Glycosyltransferase, GT2 family.
  
  
 0.494
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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