Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK50059.1 | SEK50081.1 | SAMN05216208_0929 | SAMN05216208_0930 | EcsC protein family protein. | Predicted N-acetyltransferase YhbS. | 0.801 |
SEK50059.1 | SEK50107.1 | SAMN05216208_0929 | SAMN05216208_0931 | EcsC protein family protein. | Sulfate permease, SulP family. | 0.495 |
SEK50081.1 | SEK50059.1 | SAMN05216208_0930 | SAMN05216208_0929 | Predicted N-acetyltransferase YhbS. | EcsC protein family protein. | 0.801 |
SEK50081.1 | SEK50107.1 | SAMN05216208_0930 | SAMN05216208_0931 | Predicted N-acetyltransferase YhbS. | Sulfate permease, SulP family. | 0.561 |
SEK50081.1 | ispDF | SAMN05216208_0930 | SAMN05216208_0163 | Predicted N-acetyltransferase YhbS. | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.692 |
SEK50081.1 | mtnP | SAMN05216208_0930 | SAMN05216208_0932 | Predicted N-acetyltransferase YhbS. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.415 |
SEK50107.1 | SEK50059.1 | SAMN05216208_0931 | SAMN05216208_0929 | Sulfate permease, SulP family. | EcsC protein family protein. | 0.495 |
SEK50107.1 | SEK50081.1 | SAMN05216208_0931 | SAMN05216208_0930 | Sulfate permease, SulP family. | Predicted N-acetyltransferase YhbS. | 0.561 |
SEK50107.1 | mtnP | SAMN05216208_0931 | SAMN05216208_0932 | Sulfate permease, SulP family. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.608 |
ispDF | SEK50081.1 | SAMN05216208_0163 | SAMN05216208_0930 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | Predicted N-acetyltransferase YhbS. | 0.692 |
mtnP | SEK50081.1 | SAMN05216208_0932 | SAMN05216208_0930 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | Predicted N-acetyltransferase YhbS. | 0.415 |
mtnP | SEK50107.1 | SAMN05216208_0932 | SAMN05216208_0931 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | Sulfate permease, SulP family. | 0.608 |