STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK51063.1Aldehyde dehydrogenase (NAD+). (483 aa)    
Predicted Functional Partners:
SEK51149.1
Hypothetical protein.
 
     0.763
SEK69650.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.761
SEK51182.1
Protein of unknown function.
 
     0.757
SEK51092.1
Zn-dependent dipeptidase, dipeptidase homolog.
 
     0.754
SEK91752.1
Acyl transferase domain-containing protein.
   
 0.754
SEK56613.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.707
SEK51041.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.681
SEL25396.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.651
SEK34515.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.630
SEK91703.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
     
 0.615
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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