Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK34515.1 | SEK51063.1 | SAMN05216208_0370 | SAMN05216208_0965 | Citrate synthase; Belongs to the citrate synthase family. | Aldehyde dehydrogenase (NAD+). | 0.630 |
SEK34515.1 | SEK56613.1 | SAMN05216208_0370 | SAMN05216208_1178 | Citrate synthase; Belongs to the citrate synthase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.803 |
SEK34515.1 | SEK69650.1 | SAMN05216208_0370 | SAMN05216208_1712 | Citrate synthase; Belongs to the citrate synthase family. | Glutamate synthase (NADPH) large subunit. | 0.969 |
SEK34515.1 | SEK91752.1 | SAMN05216208_0370 | SAMN05216208_2158 | Citrate synthase; Belongs to the citrate synthase family. | Acyl transferase domain-containing protein. | 0.782 |
SEK34515.1 | SEL25396.1 | SAMN05216208_0370 | SAMN05216208_3219 | Citrate synthase; Belongs to the citrate synthase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.522 |
SEK51041.1 | SEK51063.1 | SAMN05216208_0964 | SAMN05216208_0965 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Aldehyde dehydrogenase (NAD+). | 0.681 |
SEK51041.1 | SEK51092.1 | SAMN05216208_0964 | SAMN05216208_0966 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Zn-dependent dipeptidase, dipeptidase homolog. | 0.744 |
SEK51041.1 | SEK51149.1 | SAMN05216208_0964 | SAMN05216208_0968 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.792 |
SEK51041.1 | SEK51182.1 | SAMN05216208_0964 | SAMN05216208_0969 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Protein of unknown function. | 0.801 |
SEK51063.1 | SEK34515.1 | SAMN05216208_0965 | SAMN05216208_0370 | Aldehyde dehydrogenase (NAD+). | Citrate synthase; Belongs to the citrate synthase family. | 0.630 |
SEK51063.1 | SEK51041.1 | SAMN05216208_0965 | SAMN05216208_0964 | Aldehyde dehydrogenase (NAD+). | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.681 |
SEK51063.1 | SEK51092.1 | SAMN05216208_0965 | SAMN05216208_0966 | Aldehyde dehydrogenase (NAD+). | Zn-dependent dipeptidase, dipeptidase homolog. | 0.754 |
SEK51063.1 | SEK51149.1 | SAMN05216208_0965 | SAMN05216208_0968 | Aldehyde dehydrogenase (NAD+). | Hypothetical protein. | 0.763 |
SEK51063.1 | SEK51182.1 | SAMN05216208_0965 | SAMN05216208_0969 | Aldehyde dehydrogenase (NAD+). | Protein of unknown function. | 0.757 |
SEK51063.1 | SEK56613.1 | SAMN05216208_0965 | SAMN05216208_1178 | Aldehyde dehydrogenase (NAD+). | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.707 |
SEK51063.1 | SEK69650.1 | SAMN05216208_0965 | SAMN05216208_1712 | Aldehyde dehydrogenase (NAD+). | Glutamate synthase (NADPH) large subunit. | 0.761 |
SEK51063.1 | SEK91703.1 | SAMN05216208_0965 | SAMN05216208_2156 | Aldehyde dehydrogenase (NAD+). | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.615 |
SEK51063.1 | SEK91752.1 | SAMN05216208_0965 | SAMN05216208_2158 | Aldehyde dehydrogenase (NAD+). | Acyl transferase domain-containing protein. | 0.754 |
SEK51063.1 | SEL25396.1 | SAMN05216208_0965 | SAMN05216208_3219 | Aldehyde dehydrogenase (NAD+). | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.651 |
SEK51092.1 | SEK51041.1 | SAMN05216208_0966 | SAMN05216208_0964 | Zn-dependent dipeptidase, dipeptidase homolog. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.744 |
page 1 of 3