STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK51307.1Capsular polysaccharide export protein. (674 aa)    
Predicted Functional Partners:
SEK51279.1
Polysaccharide export outer membrane protein.
 
  
 0.983
SEL28259.1
Capsular polysaccharide transport system permease protein.
 
  
 0.969
SEK56240.1
Capsular polysaccharide transport system permease protein.
 
  
 0.963
SEK51235.1
Capsular polysaccharide export protein.
   
 0.961
SEK56231.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.961
SEL28240.1
Capsular polysaccharide transport system permease protein.
 
  
 0.960
SEK79863.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.957
SEL28279.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.955
SEK57914.1
Polysaccharide export outer membrane protein.
 
  
 0.899
SEK96328.1
Polysaccharide export outer membrane protein.
  
  
 0.801
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.