STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK52672.1S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)    
Predicted Functional Partners:
SEK56956.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
SEK69614.1
Alcohol dehydrogenase, class IV.
    
 0.966
SEK59700.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.906
SEK65114.1
Hypothetical protein NreA.
  
  
 0.826
SEK60194.1
Aldehyde dehydrogenase (NAD+).
 
 
 0.813
SEL16703.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.813
SEK33347.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
    
 0.694
SEK52691.1
Peptidase inhibitor I78 family protein.
       0.547
SEK70638.1
2-oxoisovalerate dehydrogenase E1 component.
     
 0.520
SEL11009.1
2-oxoisovalerate dehydrogenase E1 component.
     
 0.520
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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