Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK40483.1 | SEK40508.1 | SAMN05216208_0587 | SAMN05216208_0588 | Uncharacterized membrane protein. | Hypothetical protein; Belongs to the UPF0276 family. | 0.991 |
SEK40483.1 | SEK55224.1 | SAMN05216208_0587 | SAMN05216208_1122 | Uncharacterized membrane protein. | Protein of unknown function. | 0.677 |
SEK40483.1 | SEL33833.1 | SAMN05216208_0587 | SAMN05216208_3476 | Uncharacterized membrane protein. | Type IV secretion system protein VirB3. | 0.835 |
SEK40508.1 | SEK40483.1 | SAMN05216208_0588 | SAMN05216208_0587 | Hypothetical protein; Belongs to the UPF0276 family. | Uncharacterized membrane protein. | 0.991 |
SEK40508.1 | SEK55224.1 | SAMN05216208_0588 | SAMN05216208_1122 | Hypothetical protein; Belongs to the UPF0276 family. | Protein of unknown function. | 0.802 |
SEK40508.1 | SEL33833.1 | SAMN05216208_0588 | SAMN05216208_3476 | Hypothetical protein; Belongs to the UPF0276 family. | Type IV secretion system protein VirB3. | 0.802 |
SEK55171.1 | SEK55193.1 | SAMN05216208_1120 | SAMN05216208_1121 | Diguanylate cyclase (GGDEF) domain-containing protein. | Haem-NO-binding. | 0.990 |
SEK55171.1 | SEK55224.1 | SAMN05216208_1120 | SAMN05216208_1122 | Diguanylate cyclase (GGDEF) domain-containing protein. | Protein of unknown function. | 0.705 |
SEK55193.1 | SEK55171.1 | SAMN05216208_1121 | SAMN05216208_1120 | Haem-NO-binding. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.990 |
SEK55193.1 | SEK55224.1 | SAMN05216208_1121 | SAMN05216208_1122 | Haem-NO-binding. | Protein of unknown function. | 0.771 |
SEK55224.1 | SEK40483.1 | SAMN05216208_1122 | SAMN05216208_0587 | Protein of unknown function. | Uncharacterized membrane protein. | 0.677 |
SEK55224.1 | SEK40508.1 | SAMN05216208_1122 | SAMN05216208_0588 | Protein of unknown function. | Hypothetical protein; Belongs to the UPF0276 family. | 0.802 |
SEK55224.1 | SEK55171.1 | SAMN05216208_1122 | SAMN05216208_1120 | Protein of unknown function. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.705 |
SEK55224.1 | SEK55193.1 | SAMN05216208_1122 | SAMN05216208_1121 | Protein of unknown function. | Haem-NO-binding. | 0.771 |
SEK55224.1 | SEK65335.1 | SAMN05216208_1122 | SAMN05216208_1558 | Protein of unknown function. | EF hand. | 0.871 |
SEK55224.1 | SEK78081.1 | SAMN05216208_1122 | SAMN05216208_2030 | Protein of unknown function. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.616 |
SEK55224.1 | SEL33833.1 | SAMN05216208_1122 | SAMN05216208_3476 | Protein of unknown function. | Type IV secretion system protein VirB3. | 0.769 |
SEK55224.1 | SEL35018.1 | SAMN05216208_1122 | SAMN05216208_3526 | Protein of unknown function. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.852 |
SEK55224.1 | atpE | SAMN05216208_1122 | SAMN05216208_0845 | Protein of unknown function. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.663 |
SEK55224.1 | atpE-2 | SAMN05216208_1122 | SAMN05216208_1481 | Protein of unknown function. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.663 |
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