Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK35476.1 | SEK56279.1 | SAMN05216208_0403 | SAMN05216208_1166 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Exodeoxyribonuclease-5. | 0.940 |
SEK35476.1 | SEK74315.1 | SAMN05216208_0403 | SAMN05216208_1876 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.684 |
SEK35476.1 | SEK79416.1 | SAMN05216208_0403 | SAMN05216208_2083 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase RecQ. | 0.984 |
SEK35476.1 | SEL26153.1 | SAMN05216208_0403 | SAMN05216208_3249 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.973 |
SEK35476.1 | polA | SAMN05216208_0403 | SAMN05216208_3194 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.927 |
SEK35476.1 | truB | SAMN05216208_0403 | SAMN05216208_2065 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.461 |
SEK51363.1 | SEK56170.1 | SAMN05216208_0975 | SAMN05216208_1161 | Hypothetical protein. | SseB protein N-terminal domain-containing protein. | 0.772 |
SEK51363.1 | SEK56279.1 | SAMN05216208_0975 | SAMN05216208_1166 | Hypothetical protein. | Exodeoxyribonuclease-5. | 0.773 |
SEK51363.1 | SEK94211.1 | SAMN05216208_0975 | SAMN05216208_2251 | Hypothetical protein. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.764 |
SEK51363.1 | SEL10433.1 | SAMN05216208_0975 | SAMN05216208_2701 | Hypothetical protein. | Hypothetical protein. | 0.765 |
SEK56170.1 | SEK51363.1 | SAMN05216208_1161 | SAMN05216208_0975 | SseB protein N-terminal domain-containing protein. | Hypothetical protein. | 0.772 |
SEK56170.1 | SEK56279.1 | SAMN05216208_1161 | SAMN05216208_1166 | SseB protein N-terminal domain-containing protein. | Exodeoxyribonuclease-5. | 0.820 |
SEK56170.1 | SEK94211.1 | SAMN05216208_1161 | SAMN05216208_2251 | SseB protein N-terminal domain-containing protein. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.759 |
SEK56170.1 | SEL10433.1 | SAMN05216208_1161 | SAMN05216208_2701 | SseB protein N-terminal domain-containing protein. | Hypothetical protein. | 0.747 |
SEK56279.1 | SEK35476.1 | SAMN05216208_1166 | SAMN05216208_0403 | Exodeoxyribonuclease-5. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.940 |
SEK56279.1 | SEK51363.1 | SAMN05216208_1166 | SAMN05216208_0975 | Exodeoxyribonuclease-5. | Hypothetical protein. | 0.773 |
SEK56279.1 | SEK56170.1 | SAMN05216208_1166 | SAMN05216208_1161 | Exodeoxyribonuclease-5. | SseB protein N-terminal domain-containing protein. | 0.820 |
SEK56279.1 | SEK74315.1 | SAMN05216208_1166 | SAMN05216208_1876 | Exodeoxyribonuclease-5. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.980 |
SEK56279.1 | SEK79416.1 | SAMN05216208_1166 | SAMN05216208_2083 | Exodeoxyribonuclease-5. | ATP-dependent DNA helicase RecQ. | 0.960 |
SEK56279.1 | SEK94211.1 | SAMN05216208_1166 | SAMN05216208_2251 | Exodeoxyribonuclease-5. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.771 |
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