Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK40017.1 | SEK55582.1 | SAMN05216208_0569 | SAMN05216208_1136 | ABC transporter, phosphonate, substrate-binding protein. | Fatty acid desaturase. | 0.830 |
SEK40017.1 | SEK55619.1 | SAMN05216208_0569 | SAMN05216208_1138 | ABC transporter, phosphonate, substrate-binding protein. | Helix-turn-helix. | 0.784 |
SEK40017.1 | SEK59220.1 | SAMN05216208_0569 | SAMN05216208_1281 | ABC transporter, phosphonate, substrate-binding protein. | Dimethylsulfoniopropionate lyase DddP. | 0.585 |
SEK40017.1 | SEK98265.1 | SAMN05216208_0569 | SAMN05216208_2413 | ABC transporter, phosphonate, substrate-binding protein. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.495 |
SEK55582.1 | SEK40017.1 | SAMN05216208_1136 | SAMN05216208_0569 | Fatty acid desaturase. | ABC transporter, phosphonate, substrate-binding protein. | 0.830 |
SEK55582.1 | SEK55619.1 | SAMN05216208_1136 | SAMN05216208_1138 | Fatty acid desaturase. | Helix-turn-helix. | 0.917 |
SEK55582.1 | SEK59220.1 | SAMN05216208_1136 | SAMN05216208_1281 | Fatty acid desaturase. | Dimethylsulfoniopropionate lyase DddP. | 0.662 |
SEK55582.1 | SEK94015.1 | SAMN05216208_1136 | SAMN05216208_2243 | Fatty acid desaturase. | Hypothetical protein. | 0.496 |
SEK55582.1 | SEK98265.1 | SAMN05216208_1136 | SAMN05216208_2413 | Fatty acid desaturase. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.679 |
SEK55619.1 | SEK40017.1 | SAMN05216208_1138 | SAMN05216208_0569 | Helix-turn-helix. | ABC transporter, phosphonate, substrate-binding protein. | 0.784 |
SEK55619.1 | SEK55582.1 | SAMN05216208_1138 | SAMN05216208_1136 | Helix-turn-helix. | Fatty acid desaturase. | 0.917 |
SEK55619.1 | SEK59220.1 | SAMN05216208_1138 | SAMN05216208_1281 | Helix-turn-helix. | Dimethylsulfoniopropionate lyase DddP. | 0.584 |
SEK55619.1 | SEK98265.1 | SAMN05216208_1138 | SAMN05216208_2413 | Helix-turn-helix. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.506 |
SEK59189.1 | SEK59220.1 | SAMN05216208_1280 | SAMN05216208_1281 | Membrane-bound lytic murein transglycosylase B. | Dimethylsulfoniopropionate lyase DddP. | 0.611 |
SEK59220.1 | SEK40017.1 | SAMN05216208_1281 | SAMN05216208_0569 | Dimethylsulfoniopropionate lyase DddP. | ABC transporter, phosphonate, substrate-binding protein. | 0.585 |
SEK59220.1 | SEK55582.1 | SAMN05216208_1281 | SAMN05216208_1136 | Dimethylsulfoniopropionate lyase DddP. | Fatty acid desaturase. | 0.662 |
SEK59220.1 | SEK55619.1 | SAMN05216208_1281 | SAMN05216208_1138 | Dimethylsulfoniopropionate lyase DddP. | Helix-turn-helix. | 0.584 |
SEK59220.1 | SEK59189.1 | SAMN05216208_1281 | SAMN05216208_1280 | Dimethylsulfoniopropionate lyase DddP. | Membrane-bound lytic murein transglycosylase B. | 0.611 |
SEK59220.1 | SEK68094.1 | SAMN05216208_1281 | SAMN05216208_1661 | Dimethylsulfoniopropionate lyase DddP. | Sarcosine oxidase, gamma subunit family, heterotetrameric form. | 0.588 |
SEK59220.1 | SEK93985.1 | SAMN05216208_1281 | SAMN05216208_2242 | Dimethylsulfoniopropionate lyase DddP. | Phenylpropionate dioxygenase, large terminal subunit. | 0.607 |
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