Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK60708.1 | SEK60731.1 | SAMN05216208_1343 | SAMN05216208_1344 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Homocysteine S-methyltransferase. | 0.781 |
SEK60708.1 | SEK60760.1 | SAMN05216208_1343 | SAMN05216208_1345 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Hypothetical protein. | 0.737 |
SEK60708.1 | SEK60775.1 | SAMN05216208_1343 | SAMN05216208_1346 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.987 |
SEK60708.1 | SEK60801.1 | SAMN05216208_1343 | SAMN05216208_1347 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Uncharacterized conserved protein. | 0.841 |
SEK60708.1 | SEK60831.1 | SAMN05216208_1343 | SAMN05216208_1348 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Uncharacterized conserved protein. | 0.844 |
SEK60708.1 | SEK60843.1 | SAMN05216208_1343 | SAMN05216208_1349 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.702 |
SEK60708.1 | SEK60870.1 | SAMN05216208_1343 | SAMN05216208_1350 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Transcriptional regulator, XRE family with cupin sensor. | 0.883 |
SEK60708.1 | SEK60895.1 | SAMN05216208_1343 | SAMN05216208_1351 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | GAF domain-containing protein. | 0.506 |
SEK60708.1 | SEK98202.1 | SAMN05216208_1343 | SAMN05216208_2411 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.954 |
SEK60708.1 | SEK98265.1 | SAMN05216208_1343 | SAMN05216208_2413 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.953 |
SEK60731.1 | SEK60708.1 | SAMN05216208_1344 | SAMN05216208_1343 | Homocysteine S-methyltransferase. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.781 |
SEK60731.1 | SEK60760.1 | SAMN05216208_1344 | SAMN05216208_1345 | Homocysteine S-methyltransferase. | Hypothetical protein. | 0.794 |
SEK60731.1 | SEK60775.1 | SAMN05216208_1344 | SAMN05216208_1346 | Homocysteine S-methyltransferase. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.842 |
SEK60731.1 | SEK60801.1 | SAMN05216208_1344 | SAMN05216208_1347 | Homocysteine S-methyltransferase. | Uncharacterized conserved protein. | 0.755 |
SEK60731.1 | SEK60831.1 | SAMN05216208_1344 | SAMN05216208_1348 | Homocysteine S-methyltransferase. | Uncharacterized conserved protein. | 0.755 |
SEK60731.1 | SEK60843.1 | SAMN05216208_1344 | SAMN05216208_1349 | Homocysteine S-methyltransferase. | Threonine/homoserine/homoserine lactone efflux protein. | 0.758 |
SEK60731.1 | SEK60870.1 | SAMN05216208_1344 | SAMN05216208_1350 | Homocysteine S-methyltransferase. | Transcriptional regulator, XRE family with cupin sensor. | 0.810 |
SEK60731.1 | SEK60895.1 | SAMN05216208_1344 | SAMN05216208_1351 | Homocysteine S-methyltransferase. | GAF domain-containing protein. | 0.874 |
SEK60760.1 | SEK60708.1 | SAMN05216208_1345 | SAMN05216208_1343 | Hypothetical protein. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.737 |
SEK60760.1 | SEK60731.1 | SAMN05216208_1345 | SAMN05216208_1344 | Hypothetical protein. | Homocysteine S-methyltransferase. | 0.794 |
page 1 of 5