Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK57265.1 | SEK66383.1 | SAMN05216208_1203 | SAMN05216208_1599 | D-alanine transaminase. | Branched-chain amino acid aminotransferase. | 0.740 |
SEK57265.1 | SEK69650.1 | SAMN05216208_1203 | SAMN05216208_1712 | D-alanine transaminase. | Glutamate synthase (NADPH) large subunit. | 0.434 |
SEK57265.1 | SEK77109.1 | SAMN05216208_1203 | SAMN05216208_1992 | D-alanine transaminase. | 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.931 |
SEK57265.1 | SEK93884.1 | SAMN05216208_1203 | SAMN05216208_2238 | D-alanine transaminase. | Acetolactate synthase, large subunit. | 0.458 |
SEK57265.1 | SEK93910.1 | SAMN05216208_1203 | SAMN05216208_2239 | D-alanine transaminase. | Acetolactate synthase, small subunit. | 0.558 |
SEK57265.1 | ilvD | SAMN05216208_1203 | SAMN05216208_1474 | D-alanine transaminase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.954 |
SEK57265.1 | ilvE | SAMN05216208_1203 | SAMN05216208_1944 | D-alanine transaminase. | Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.733 |
SEK57265.1 | leuA | SAMN05216208_1203 | SAMN05216208_1034 | D-alanine transaminase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.931 |
SEK66383.1 | SEK57265.1 | SAMN05216208_1599 | SAMN05216208_1203 | Branched-chain amino acid aminotransferase. | D-alanine transaminase. | 0.740 |
SEK66383.1 | SEK69650.1 | SAMN05216208_1599 | SAMN05216208_1712 | Branched-chain amino acid aminotransferase. | Glutamate synthase (NADPH) large subunit. | 0.434 |
SEK66383.1 | SEK77109.1 | SAMN05216208_1599 | SAMN05216208_1992 | Branched-chain amino acid aminotransferase. | 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.975 |
SEK66383.1 | SEK93884.1 | SAMN05216208_1599 | SAMN05216208_2238 | Branched-chain amino acid aminotransferase. | Acetolactate synthase, large subunit. | 0.477 |
SEK66383.1 | SEK93910.1 | SAMN05216208_1599 | SAMN05216208_2239 | Branched-chain amino acid aminotransferase. | Acetolactate synthase, small subunit. | 0.655 |
SEK66383.1 | ilvC | SAMN05216208_1599 | SAMN05216208_1616 | Branched-chain amino acid aminotransferase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.419 |
SEK66383.1 | ilvD | SAMN05216208_1599 | SAMN05216208_1474 | Branched-chain amino acid aminotransferase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.987 |
SEK66383.1 | ilvE | SAMN05216208_1599 | SAMN05216208_1944 | Branched-chain amino acid aminotransferase. | Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.913 |
SEK66383.1 | leuA | SAMN05216208_1599 | SAMN05216208_1034 | Branched-chain amino acid aminotransferase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.975 |
SEK66383.1 | leuB | SAMN05216208_1599 | SAMN05216208_3207 | Branched-chain amino acid aminotransferase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.444 |
SEK69650.1 | SEK57265.1 | SAMN05216208_1712 | SAMN05216208_1203 | Glutamate synthase (NADPH) large subunit. | D-alanine transaminase. | 0.434 |
SEK69650.1 | SEK66383.1 | SAMN05216208_1712 | SAMN05216208_1599 | Glutamate synthase (NADPH) large subunit. | Branched-chain amino acid aminotransferase. | 0.434 |
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