Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEK29484.1 | SEK35511.1 | SAMN05216208_0185 | SAMN05216208_0404 | Invasion protein IalB, involved in pathogenesis. | Cell division protein ZapA. | 0.543 |
| SEK29484.1 | SEK59973.1 | SAMN05216208_0185 | SAMN05216208_1312 | Invasion protein IalB, involved in pathogenesis. | HemY protein. | 0.630 |
| SEK29484.1 | SEK66608.1 | SAMN05216208_0185 | SAMN05216208_1607 | Invasion protein IalB, involved in pathogenesis. | Uncharacterized membrane protein. | 0.451 |
| SEK29484.1 | SEK67103.1 | SAMN05216208_0185 | SAMN05216208_1625 | Invasion protein IalB, involved in pathogenesis. | Hypothetical protein. | 0.495 |
| SEK29484.1 | SEL02570.1 | SAMN05216208_0185 | SAMN05216208_2569 | Invasion protein IalB, involved in pathogenesis. | Hypothetical protein. | 0.634 |
| SEK35511.1 | SEK29484.1 | SAMN05216208_0404 | SAMN05216208_0185 | Cell division protein ZapA. | Invasion protein IalB, involved in pathogenesis. | 0.543 |
| SEK35511.1 | SEK55517.1 | SAMN05216208_0404 | SAMN05216208_1133 | Cell division protein ZapA. | Uncharacterized conserved protein, DUF983 family. | 0.403 |
| SEK35511.1 | SEK59973.1 | SAMN05216208_0404 | SAMN05216208_1312 | Cell division protein ZapA. | HemY protein. | 0.597 |
| SEK35511.1 | SEK66608.1 | SAMN05216208_0404 | SAMN05216208_1607 | Cell division protein ZapA. | Uncharacterized membrane protein. | 0.472 |
| SEK35511.1 | SEK67103.1 | SAMN05216208_0404 | SAMN05216208_1625 | Cell division protein ZapA. | Hypothetical protein. | 0.508 |
| SEK35511.1 | SEL02570.1 | SAMN05216208_0404 | SAMN05216208_2569 | Cell division protein ZapA. | Hypothetical protein. | 0.469 |
| SEK53203.1 | SEK53346.1 | SAMN05216208_1042 | SAMN05216208_1047 | Surfeit locus 1 family protein. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.867 |
| SEK53203.1 | SEK55517.1 | SAMN05216208_1042 | SAMN05216208_1133 | Surfeit locus 1 family protein. | Uncharacterized conserved protein, DUF983 family. | 0.584 |
| SEK53203.1 | SEK55881.1 | SAMN05216208_1042 | SAMN05216208_1149 | Surfeit locus 1 family protein. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.752 |
| SEK53203.1 | SEK59973.1 | SAMN05216208_1042 | SAMN05216208_1312 | Surfeit locus 1 family protein. | HemY protein. | 0.494 |
| SEK53203.1 | SEK66608.1 | SAMN05216208_1042 | SAMN05216208_1607 | Surfeit locus 1 family protein. | Uncharacterized membrane protein. | 0.470 |
| SEK53346.1 | SEK53203.1 | SAMN05216208_1047 | SAMN05216208_1042 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Surfeit locus 1 family protein. | 0.867 |
| SEK53346.1 | SEK55517.1 | SAMN05216208_1047 | SAMN05216208_1133 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Uncharacterized conserved protein, DUF983 family. | 0.453 |
| SEK53346.1 | SEK55881.1 | SAMN05216208_1047 | SAMN05216208_1149 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| SEK53346.1 | SEK66608.1 | SAMN05216208_1047 | SAMN05216208_1607 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Uncharacterized membrane protein. | 0.495 |
page 1 of 3