Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK52748.1 | SEK66970.1 | SAMN05216208_1025 | SAMN05216208_1621 | Protein of unknown function. | Cell Wall Hydrolase. | 0.427 |
SEK66918.1 | SEK66945.1 | SAMN05216208_1619 | SAMN05216208_1620 | Dihydropteroate synthase. | Dihydroneopterin aldolase. | 0.999 |
SEK66918.1 | SEK66970.1 | SAMN05216208_1619 | SAMN05216208_1621 | Dihydropteroate synthase. | Cell Wall Hydrolase. | 0.691 |
SEK66918.1 | SEK67006.1 | SAMN05216208_1619 | SAMN05216208_1622 | Dihydropteroate synthase. | Pyruvate, orthophosphate dikinase. | 0.508 |
SEK66918.1 | glyS | SAMN05216208_1619 | SAMN05216208_1623 | Dihydropteroate synthase. | glycyl-tRNA synthetase beta chain. | 0.438 |
SEK66945.1 | SEK66918.1 | SAMN05216208_1620 | SAMN05216208_1619 | Dihydroneopterin aldolase. | Dihydropteroate synthase. | 0.999 |
SEK66945.1 | SEK66970.1 | SAMN05216208_1620 | SAMN05216208_1621 | Dihydroneopterin aldolase. | Cell Wall Hydrolase. | 0.691 |
SEK66945.1 | SEK67006.1 | SAMN05216208_1620 | SAMN05216208_1622 | Dihydroneopterin aldolase. | Pyruvate, orthophosphate dikinase. | 0.526 |
SEK66970.1 | SEK52748.1 | SAMN05216208_1621 | SAMN05216208_1025 | Cell Wall Hydrolase. | Protein of unknown function. | 0.427 |
SEK66970.1 | SEK66918.1 | SAMN05216208_1621 | SAMN05216208_1619 | Cell Wall Hydrolase. | Dihydropteroate synthase. | 0.691 |
SEK66970.1 | SEK66945.1 | SAMN05216208_1621 | SAMN05216208_1620 | Cell Wall Hydrolase. | Dihydroneopterin aldolase. | 0.691 |
SEK66970.1 | SEK67006.1 | SAMN05216208_1621 | SAMN05216208_1622 | Cell Wall Hydrolase. | Pyruvate, orthophosphate dikinase. | 0.671 |
SEK66970.1 | SEK67103.1 | SAMN05216208_1621 | SAMN05216208_1625 | Cell Wall Hydrolase. | Hypothetical protein. | 0.416 |
SEK66970.1 | glyQ | SAMN05216208_1621 | SAMN05216208_1626 | Cell Wall Hydrolase. | glycyl-tRNA synthetase alpha chain. | 0.413 |
SEK66970.1 | glyS | SAMN05216208_1621 | SAMN05216208_1623 | Cell Wall Hydrolase. | glycyl-tRNA synthetase beta chain. | 0.488 |
SEK67006.1 | SEK66918.1 | SAMN05216208_1622 | SAMN05216208_1619 | Pyruvate, orthophosphate dikinase. | Dihydropteroate synthase. | 0.508 |
SEK67006.1 | SEK66945.1 | SAMN05216208_1622 | SAMN05216208_1620 | Pyruvate, orthophosphate dikinase. | Dihydroneopterin aldolase. | 0.526 |
SEK67006.1 | SEK66970.1 | SAMN05216208_1622 | SAMN05216208_1621 | Pyruvate, orthophosphate dikinase. | Cell Wall Hydrolase. | 0.671 |
SEK67006.1 | SEK67103.1 | SAMN05216208_1622 | SAMN05216208_1625 | Pyruvate, orthophosphate dikinase. | Hypothetical protein. | 0.564 |
SEK67006.1 | glyQ | SAMN05216208_1622 | SAMN05216208_1626 | Pyruvate, orthophosphate dikinase. | glycyl-tRNA synthetase alpha chain. | 0.541 |
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