STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK70838.1Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (346 aa)    
Predicted Functional Partners:
SEK70672.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 0.994
SEK79375.1
Hypothetical protein.
 
0.991
SEK49134.1
Response regulator receiver domain-containing protein.
  
 0.971
SEK58215.1
Response regulator receiver domain-containing protein.
  
 0.966
SEK55913.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
 0.931
SEK76053.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
 
 0.912
SEK58092.1
Response regulator receiver domain-containing protein.
  
 0.908
SEK45380.1
Two component transcriptional regulator, winged helix family.
 
 0.905
SEK58061.1
Response regulator receiver domain-containing protein.
  
 0.902
SEK65381.1
Two-component system, OmpR family, response regulator.
 
 0.894
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.