Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK33347.1 | SEK71685.1 | SAMN05216208_0326 | SAMN05216208_1781 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Luciferase family oxidoreductase, group 1. | 0.501 |
SEK33347.1 | SEK91703.1 | SAMN05216208_0326 | SAMN05216208_2156 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.821 |
SEK33347.1 | SEK91752.1 | SAMN05216208_0326 | SAMN05216208_2158 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Acyl transferase domain-containing protein. | 0.760 |
SEK33347.1 | SEL12956.1 | SAMN05216208_0326 | SAMN05216208_2817 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Ferredoxin-NADP reductase. | 0.613 |
SEK44870.1 | SEK46868.1 | SAMN05216208_0747 | SAMN05216208_0814 | NitT/TauT family transport system substrate-binding protein. | NAD(P)H-dependent FMN reductase. | 0.497 |
SEK44870.1 | SEK71685.1 | SAMN05216208_0747 | SAMN05216208_1781 | NitT/TauT family transport system substrate-binding protein. | Luciferase family oxidoreductase, group 1. | 0.456 |
SEK44870.1 | SEK80303.1 | SAMN05216208_0747 | SAMN05216208_2119 | NitT/TauT family transport system substrate-binding protein. | Chromate reductase. | 0.497 |
SEK44870.1 | SEK91703.1 | SAMN05216208_0747 | SAMN05216208_2156 | NitT/TauT family transport system substrate-binding protein. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.602 |
SEK46868.1 | SEK44870.1 | SAMN05216208_0814 | SAMN05216208_0747 | NAD(P)H-dependent FMN reductase. | NitT/TauT family transport system substrate-binding protein. | 0.497 |
SEK46868.1 | SEK71685.1 | SAMN05216208_0814 | SAMN05216208_1781 | NAD(P)H-dependent FMN reductase. | Luciferase family oxidoreductase, group 1. | 0.552 |
SEK46868.1 | SEK91703.1 | SAMN05216208_0814 | SAMN05216208_2156 | NAD(P)H-dependent FMN reductase. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.586 |
SEK71685.1 | SEK33347.1 | SAMN05216208_1781 | SAMN05216208_0326 | Luciferase family oxidoreductase, group 1. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.501 |
SEK71685.1 | SEK44870.1 | SAMN05216208_1781 | SAMN05216208_0747 | Luciferase family oxidoreductase, group 1. | NitT/TauT family transport system substrate-binding protein. | 0.456 |
SEK71685.1 | SEK46868.1 | SAMN05216208_1781 | SAMN05216208_0814 | Luciferase family oxidoreductase, group 1. | NAD(P)H-dependent FMN reductase. | 0.552 |
SEK71685.1 | SEK71710.1 | SAMN05216208_1781 | SAMN05216208_1782 | Luciferase family oxidoreductase, group 1. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.590 |
SEK71685.1 | SEK71733.1 | SAMN05216208_1781 | SAMN05216208_1783 | Luciferase family oxidoreductase, group 1. | Diacylglycerol kinase family enzyme. | 0.590 |
SEK71685.1 | SEK80303.1 | SAMN05216208_1781 | SAMN05216208_2119 | Luciferase family oxidoreductase, group 1. | Chromate reductase. | 0.552 |
SEK71685.1 | SEK91703.1 | SAMN05216208_1781 | SAMN05216208_2156 | Luciferase family oxidoreductase, group 1. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.752 |
SEK71685.1 | SEK91752.1 | SAMN05216208_1781 | SAMN05216208_2158 | Luciferase family oxidoreductase, group 1. | Acyl transferase domain-containing protein. | 0.655 |
SEK71685.1 | SEK96795.1 | SAMN05216208_1781 | SAMN05216208_2359 | Luciferase family oxidoreductase, group 1. | Hypothetical protein. | 0.579 |
page 1 of 3