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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK72665.1Protein of unknown function. (135 aa)    
Predicted Functional Partners:
SEK72646.1
Head-tail adaptor.
 
 
   0.999
SEK72620.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
   0.998
SEK72690.1
Phage major tail protein, TP901-1 family.
 
 
   0.998
SEK72814.1
TIGR02217 family protein.
 
   0.997
SEK72841.1
Phage conserved hypothetical protein BR0599.
 
 
   0.997
SEK72916.1
Putative phage tail protein.
 
 
   0.996
SEK72586.1
Phage major capsid protein, HK97 family.
 
 
   0.995
SEK72506.1
Phage portal protein, HK97 family.
 
 
   0.994
SEK72773.1
Phage tail tape measure protein, lambda family.
 
    0.959
SEK72714.1
Phage tail tube protein, GTA-gp10.
 
     0.955
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.