Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK40923.1 | SEK73802.1 | SAMN05216208_0604 | SAMN05216208_1855 | AsmA protein. | Hypothetical protein. | 0.526 |
SEK69650.1 | SEK73802.1 | SAMN05216208_1712 | SAMN05216208_1855 | Glutamate synthase (NADPH) large subunit. | Hypothetical protein. | 0.474 |
SEK69650.1 | aroB | SAMN05216208_1712 | SAMN05216208_2403 | Glutamate synthase (NADPH) large subunit. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.474 |
SEK73802.1 | SEK40923.1 | SAMN05216208_1855 | SAMN05216208_0604 | Hypothetical protein. | AsmA protein. | 0.526 |
SEK73802.1 | SEK69650.1 | SAMN05216208_1855 | SAMN05216208_1712 | Hypothetical protein. | Glutamate synthase (NADPH) large subunit. | 0.474 |
SEK73802.1 | SEK73828.1 | SAMN05216208_1855 | SAMN05216208_1856 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.508 |
SEK73802.1 | SEK73846.1 | SAMN05216208_1855 | SAMN05216208_1857 | Hypothetical protein. | Cysteine-rich secretory protein family protein. | 0.435 |
SEK73802.1 | SEK94321.1 | SAMN05216208_1855 | SAMN05216208_2256 | Hypothetical protein. | Yip1 domain-containing protein. | 0.554 |
SEK73802.1 | SEL10131.1 | SAMN05216208_1855 | SAMN05216208_2687 | Hypothetical protein. | Hypothetical protein. | 0.466 |
SEK73802.1 | SEL12347.1 | SAMN05216208_1855 | SAMN05216208_2792 | Hypothetical protein. | Cell division and transport-associated protein TolA. | 0.453 |
SEK73802.1 | SEL35346.1 | SAMN05216208_1855 | SAMN05216208_3540 | Hypothetical protein. | Hypothetical protein. | 0.462 |
SEK73802.1 | aroB | SAMN05216208_1855 | SAMN05216208_2403 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.464 |
SEK73802.1 | nusA | SAMN05216208_1855 | SAMN05216208_1845 | Hypothetical protein. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.609 |
SEK73828.1 | SEK73802.1 | SAMN05216208_1856 | SAMN05216208_1855 | L,D-transpeptidase catalytic domain. | Hypothetical protein. | 0.508 |
SEK73828.1 | SEK73846.1 | SAMN05216208_1856 | SAMN05216208_1857 | L,D-transpeptidase catalytic domain. | Cysteine-rich secretory protein family protein. | 0.764 |
SEK73846.1 | SEK73802.1 | SAMN05216208_1857 | SAMN05216208_1855 | Cysteine-rich secretory protein family protein. | Hypothetical protein. | 0.435 |
SEK73846.1 | SEK73828.1 | SAMN05216208_1857 | SAMN05216208_1856 | Cysteine-rich secretory protein family protein. | L,D-transpeptidase catalytic domain. | 0.764 |
SEK94321.1 | SEK73802.1 | SAMN05216208_2256 | SAMN05216208_1855 | Yip1 domain-containing protein. | Hypothetical protein. | 0.554 |
SEL10131.1 | SEK73802.1 | SAMN05216208_2687 | SAMN05216208_1855 | Hypothetical protein. | Hypothetical protein. | 0.466 |
SEL12347.1 | SEK73802.1 | SAMN05216208_2792 | SAMN05216208_1855 | Cell division and transport-associated protein TolA. | Hypothetical protein. | 0.453 |
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