Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK74229.1 | SEK74252.1 | SAMN05216208_1872 | SAMN05216208_1873 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Hypothetical protein. | 0.970 |
SEK74229.1 | SEK74271.1 | SAMN05216208_1872 | SAMN05216208_1874 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | MurNAc alpha-1-phosphate uridylyltransferase. | 0.917 |
SEK74229.1 | SEK74294.1 | SAMN05216208_1872 | SAMN05216208_1875 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Double-strand break repair protein AddB. | 0.918 |
SEK74229.1 | SEK74315.1 | SAMN05216208_1872 | SAMN05216208_1876 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.875 |
SEK74252.1 | SEK74229.1 | SAMN05216208_1873 | SAMN05216208_1872 | Hypothetical protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.970 |
SEK74252.1 | SEK74271.1 | SAMN05216208_1873 | SAMN05216208_1874 | Hypothetical protein. | MurNAc alpha-1-phosphate uridylyltransferase. | 0.997 |
SEK74252.1 | SEK74294.1 | SAMN05216208_1873 | SAMN05216208_1875 | Hypothetical protein. | Double-strand break repair protein AddB. | 0.907 |
SEK74252.1 | SEK74315.1 | SAMN05216208_1873 | SAMN05216208_1876 | Hypothetical protein. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.862 |
SEK74252.1 | SEL28434.1 | SAMN05216208_1873 | SAMN05216208_3339 | Hypothetical protein. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.746 |
SEK74271.1 | SEK74229.1 | SAMN05216208_1874 | SAMN05216208_1872 | MurNAc alpha-1-phosphate uridylyltransferase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.917 |
SEK74271.1 | SEK74252.1 | SAMN05216208_1874 | SAMN05216208_1873 | MurNAc alpha-1-phosphate uridylyltransferase. | Hypothetical protein. | 0.997 |
SEK74271.1 | SEK74294.1 | SAMN05216208_1874 | SAMN05216208_1875 | MurNAc alpha-1-phosphate uridylyltransferase. | Double-strand break repair protein AddB. | 0.875 |
SEK74271.1 | SEK74315.1 | SAMN05216208_1874 | SAMN05216208_1876 | MurNAc alpha-1-phosphate uridylyltransferase. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.862 |
SEK74271.1 | SEL28108.1 | SAMN05216208_1874 | SAMN05216208_3326 | MurNAc alpha-1-phosphate uridylyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.934 |
SEK74271.1 | SEL28163.1 | SAMN05216208_1874 | SAMN05216208_3328 | MurNAc alpha-1-phosphate uridylyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.919 |
SEK74271.1 | SEL28196.1 | SAMN05216208_1874 | SAMN05216208_3329 | MurNAc alpha-1-phosphate uridylyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.944 |
SEK74271.1 | SEL28434.1 | SAMN05216208_1874 | SAMN05216208_3339 | MurNAc alpha-1-phosphate uridylyltransferase. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.913 |
SEK74271.1 | murA | SAMN05216208_1874 | SAMN05216208_2831 | MurNAc alpha-1-phosphate uridylyltransferase. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.820 |
SEK74271.1 | murB | SAMN05216208_1874 | SAMN05216208_2584 | MurNAc alpha-1-phosphate uridylyltransferase. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.903 |
SEK74294.1 | SEK74229.1 | SAMN05216208_1875 | SAMN05216208_1872 | Double-strand break repair protein AddB. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.918 |
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