Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK44617.1 | SEK50281.1 | SAMN05216208_0738 | SAMN05216208_0937 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.805 |
SEK44617.1 | SEK60511.1 | SAMN05216208_0738 | SAMN05216208_1335 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Dihydroorotase. | 0.977 |
SEK44617.1 | SEK80427.1 | SAMN05216208_0738 | SAMN05216208_2125 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.934 |
SEK44617.1 | carA | SAMN05216208_0738 | SAMN05216208_1609 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.872 |
SEK44617.1 | carB | SAMN05216208_0738 | SAMN05216208_0622 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.926 |
SEK44617.1 | pyrB | SAMN05216208_0738 | SAMN05216208_1332 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.905 |
SEK44617.1 | pyrE | SAMN05216208_0738 | SAMN05216208_0136 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.985 |
SEK44617.1 | upp | SAMN05216208_0738 | SAMN05216208_2848 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.945 |
SEK50281.1 | SEK44617.1 | SAMN05216208_0937 | SAMN05216208_0738 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | 0.805 |
SEK50281.1 | SEK60511.1 | SAMN05216208_0937 | SAMN05216208_1335 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydroorotase. | 0.992 |
SEK50281.1 | SEK80427.1 | SAMN05216208_0937 | SAMN05216208_2125 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.917 |
SEK50281.1 | carA | SAMN05216208_0937 | SAMN05216208_1609 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.928 |
SEK50281.1 | carB | SAMN05216208_0937 | SAMN05216208_0622 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.958 |
SEK50281.1 | pyrB | SAMN05216208_0937 | SAMN05216208_1332 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.933 |
SEK50281.1 | pyrE | SAMN05216208_0937 | SAMN05216208_0136 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.995 |
SEK50281.1 | upp | SAMN05216208_0937 | SAMN05216208_2848 | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.652 |
SEK60511.1 | SEK44617.1 | SAMN05216208_1335 | SAMN05216208_0738 | Dihydroorotase. | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | 0.977 |
SEK60511.1 | SEK50281.1 | SAMN05216208_1335 | SAMN05216208_0937 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.992 |
SEK60511.1 | SEK80427.1 | SAMN05216208_1335 | SAMN05216208_2125 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.895 |
SEK60511.1 | carA | SAMN05216208_1335 | SAMN05216208_1609 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.940 |
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