STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK96715.1Peptide/nickel transport system substrate-binding protein. (539 aa)    
Predicted Functional Partners:
SEK41513.1
Peptide/nickel transport system permease protein.
 
  0.863
SEK41490.1
Peptide/nickel transport system permease protein.
  
  0.858
SEK41453.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
  0.825
SEK67833.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.710
SEK96685.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
       0.556
SEL36608.1
Peptide/nickel transport system permease protein.
 
  0.528
SEK62319.1
Peptide/nickel transport system permease protein.
  
  0.524
SEL27991.1
Peptide/nickel transport system permease protein.
 
  0.524
SEK67781.1
Peptide/nickel transport system permease protein.
 
  0.518
SEK62301.1
Peptide/nickel transport system permease protein.
  
  0.485
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.