Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL03064.1 | SEL03101.1 | SAMN05216208_2585 | SAMN05216208_2586 | Hypothetical protein. | Protein of unknown function. | 0.723 |
SEL03064.1 | SEL03175.1 | SAMN05216208_2585 | SAMN05216208_2589 | Hypothetical protein. | Cell division protein FtsW; Belongs to the SEDS family. | 0.723 |
SEL03064.1 | SEL03206.1 | SAMN05216208_2585 | SAMN05216208_2590 | Hypothetical protein. | Hypothetical protein. | 0.451 |
SEL03064.1 | ddl | SAMN05216208_2585 | SAMN05216208_2583 | Hypothetical protein. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.578 |
SEL03064.1 | ftsA | SAMN05216208_2585 | SAMN05216208_2581 | Hypothetical protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.578 |
SEL03064.1 | ftsQ | SAMN05216208_2585 | SAMN05216208_2582 | Hypothetical protein. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.578 |
SEL03064.1 | murB | SAMN05216208_2585 | SAMN05216208_2584 | Hypothetical protein. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.773 |
SEL03064.1 | murC | SAMN05216208_2585 | SAMN05216208_2587 | Hypothetical protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.723 |
SEL03064.1 | murG | SAMN05216208_2585 | SAMN05216208_2588 | Hypothetical protein. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.723 |
SEL03101.1 | SEL03064.1 | SAMN05216208_2586 | SAMN05216208_2585 | Protein of unknown function. | Hypothetical protein. | 0.723 |
SEL03101.1 | SEL03175.1 | SAMN05216208_2586 | SAMN05216208_2589 | Protein of unknown function. | Cell division protein FtsW; Belongs to the SEDS family. | 0.862 |
SEL03101.1 | SEL03206.1 | SAMN05216208_2586 | SAMN05216208_2590 | Protein of unknown function. | Hypothetical protein. | 0.612 |
SEL03101.1 | ddl | SAMN05216208_2586 | SAMN05216208_2583 | Protein of unknown function. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.711 |
SEL03101.1 | ftsA | SAMN05216208_2586 | SAMN05216208_2581 | Protein of unknown function. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.706 |
SEL03101.1 | ftsQ | SAMN05216208_2586 | SAMN05216208_2582 | Protein of unknown function. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.707 |
SEL03101.1 | murB | SAMN05216208_2586 | SAMN05216208_2584 | Protein of unknown function. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.831 |
SEL03101.1 | murC | SAMN05216208_2586 | SAMN05216208_2587 | Protein of unknown function. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.862 |
SEL03101.1 | murG | SAMN05216208_2586 | SAMN05216208_2588 | Protein of unknown function. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.862 |
SEL03175.1 | SEL03064.1 | SAMN05216208_2589 | SAMN05216208_2585 | Cell division protein FtsW; Belongs to the SEDS family. | Hypothetical protein. | 0.723 |
SEL03175.1 | SEL03101.1 | SAMN05216208_2589 | SAMN05216208_2586 | Cell division protein FtsW; Belongs to the SEDS family. | Protein of unknown function. | 0.862 |
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