STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL03817.1NADPH2:quinone reductase. (324 aa)    
Predicted Functional Partners:
SEK91752.1
Acyl transferase domain-containing protein.
 
 0.952
SEK29609.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
  0.781
SEK48669.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
  0.649
SEK46324.1
Phosphate acetyltransferase/phosphate butyryltransferase.
  
 0.615
SEK72262.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.579
SEL03783.1
SH3 domain-containing protein.
       0.542
SEK91703.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.532
SEK59700.1
Alcohol dehydrogenase, propanol-preferring.
 
 
 0.422
SEK48810.1
[acyl-carrier-protein] S-malonyltransferase.
 
   
 0.414
SEL03832.1
PAP2 superfamily protein.
    
  0.412
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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