Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK39167.1 | SEK47604.1 | SAMN05216208_0537 | SAMN05216208_0839 | DnaJ domain-containing protein. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.779 |
SEK39167.1 | SEL10409.1 | SAMN05216208_0537 | SAMN05216208_2700 | DnaJ domain-containing protein. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.590 |
SEK39167.1 | SEL10433.1 | SAMN05216208_0537 | SAMN05216208_2701 | DnaJ domain-containing protein. | Hypothetical protein. | 0.518 |
SEK39167.1 | SEL14438.1 | SAMN05216208_0537 | SAMN05216208_2881 | DnaJ domain-containing protein. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.779 |
SEK39167.1 | clpB | SAMN05216208_0537 | SAMN05216208_2127 | DnaJ domain-containing protein. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.779 |
SEK39167.1 | grpE | SAMN05216208_0537 | SAMN05216208_1902 | DnaJ domain-containing protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.933 |
SEK47604.1 | SEK39167.1 | SAMN05216208_0839 | SAMN05216208_0537 | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | DnaJ domain-containing protein. | 0.779 |
SEK47604.1 | SEL10409.1 | SAMN05216208_0839 | SAMN05216208_2700 | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.820 |
SEK47604.1 | grpE | SAMN05216208_0839 | SAMN05216208_1902 | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.862 |
SEL10384.1 | SEL10409.1 | SAMN05216208_2699 | SAMN05216208_2700 | Hypothetical protein. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.703 |
SEL10384.1 | SEL10433.1 | SAMN05216208_2699 | SAMN05216208_2701 | Hypothetical protein. | Hypothetical protein. | 0.678 |
SEL10384.1 | SEL10452.1 | SAMN05216208_2699 | SAMN05216208_2702 | Hypothetical protein. | Hypothetical protein. | 0.401 |
SEL10384.1 | purE | SAMN05216208_2699 | SAMN05216208_2698 | Hypothetical protein. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.721 |
SEL10384.1 | purK | SAMN05216208_2699 | SAMN05216208_2697 | Hypothetical protein. | 5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.721 |
SEL10409.1 | SEK39167.1 | SAMN05216208_2700 | SAMN05216208_0537 | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | DnaJ domain-containing protein. | 0.590 |
SEL10409.1 | SEK47604.1 | SAMN05216208_2700 | SAMN05216208_0839 | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.820 |
SEL10409.1 | SEL10384.1 | SAMN05216208_2700 | SAMN05216208_2699 | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | Hypothetical protein. | 0.703 |
SEL10409.1 | SEL10433.1 | SAMN05216208_2700 | SAMN05216208_2701 | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | Hypothetical protein. | 0.823 |
SEL10409.1 | SEL10452.1 | SAMN05216208_2700 | SAMN05216208_2702 | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | Hypothetical protein. | 0.512 |
SEL10409.1 | SEL14438.1 | SAMN05216208_2700 | SAMN05216208_2881 | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.813 |
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