Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK45930.1 | SEK46015.1 | SAMN05216208_0782 | SAMN05216208_0785 | Formiminoglutamase. | Transcriptional regulator, GntR family. | 0.868 |
SEK45930.1 | SEL12238.1 | SAMN05216208_0782 | SAMN05216208_2788 | Formiminoglutamase. | Imidazolonepropionase. | 0.498 |
SEK45930.1 | hutH | SAMN05216208_0782 | SAMN05216208_0781 | Formiminoglutamase. | Histidine ammonia-lyase. | 0.942 |
SEK45930.1 | hutU | SAMN05216208_0782 | SAMN05216208_0783 | Formiminoglutamase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.942 |
SEK46015.1 | SEK45930.1 | SAMN05216208_0785 | SAMN05216208_0782 | Transcriptional regulator, GntR family. | Formiminoglutamase. | 0.868 |
SEK46015.1 | SEL12238.1 | SAMN05216208_0785 | SAMN05216208_2788 | Transcriptional regulator, GntR family. | Imidazolonepropionase. | 0.545 |
SEK46015.1 | hutH | SAMN05216208_0785 | SAMN05216208_0781 | Transcriptional regulator, GntR family. | Histidine ammonia-lyase. | 0.819 |
SEK46015.1 | hutU | SAMN05216208_0785 | SAMN05216208_0783 | Transcriptional regulator, GntR family. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.788 |
SEK78357.1 | SEL12238.1 | SAMN05216208_2042 | SAMN05216208_2788 | Putative hydrolase of the HAD superfamily. | Imidazolonepropionase. | 0.525 |
SEL11955.1 | SEL12007.1 | SAMN05216208_2776 | SAMN05216208_2778 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.996 |
SEL11955.1 | SEL12050.1 | SAMN05216208_2776 | SAMN05216208_2780 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | Maleamate amidohydrolase. | 0.847 |
SEL11955.1 | SEL12238.1 | SAMN05216208_2776 | SAMN05216208_2788 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | Imidazolonepropionase. | 0.563 |
SEL12007.1 | SEL11955.1 | SAMN05216208_2778 | SAMN05216208_2776 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.996 |
SEL12007.1 | SEL12050.1 | SAMN05216208_2778 | SAMN05216208_2780 | TRAP-type C4-dicarboxylate transport system, small permease component. | Maleamate amidohydrolase. | 0.861 |
SEL12007.1 | SEL12238.1 | SAMN05216208_2778 | SAMN05216208_2788 | TRAP-type C4-dicarboxylate transport system, small permease component. | Imidazolonepropionase. | 0.573 |
SEL12050.1 | SEL11955.1 | SAMN05216208_2780 | SAMN05216208_2776 | Maleamate amidohydrolase. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.847 |
SEL12050.1 | SEL12007.1 | SAMN05216208_2780 | SAMN05216208_2778 | Maleamate amidohydrolase. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.861 |
SEL12050.1 | SEL12238.1 | SAMN05216208_2780 | SAMN05216208_2788 | Maleamate amidohydrolase. | Imidazolonepropionase. | 0.670 |
SEL12213.1 | SEL12238.1 | SAMN05216208_2787 | SAMN05216208_2788 | Hypothetical protein. | Imidazolonepropionase. | 0.552 |
SEL12238.1 | SEK45930.1 | SAMN05216208_2788 | SAMN05216208_0782 | Imidazolonepropionase. | Formiminoglutamase. | 0.498 |
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