STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL12982.1Protein of unknown function. (364 aa)    
Predicted Functional Partners:
SEL12930.1
Hypothetical protein.
 
   
 0.948
SEL12956.1
Ferredoxin-NADP reductase.
 
   
 0.946
SEL12908.1
Aminomethyltransferase; Belongs to the GcvT family.
 
   
 0.889
SEL12582.1
Aminomethyltransferase; Belongs to the GcvT family.
 
   
 0.826
SEL12667.1
Trimethylamine monooxygenase.
 
     0.803
SEL12820.1
N-methylglutamate synthase subunit A.
 
     0.726
SEL12796.1
N-methylglutamate synthase subunit B.
 
     0.681
SEL12772.1
N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family.
 
     0.673
SEL12885.1
Ammonium transporter.
 
     0.672
SEL12611.1
Hemoglobin.
  
     0.591
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.