Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK30975.1 | SEK57186.1 | SAMN05216208_0239 | SAMN05216208_1200 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.906 |
SEK30975.1 | SEL16423.1 | SAMN05216208_0239 | SAMN05216208_2959 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 3-methylfumaryl-CoA hydratase. | 0.537 |
SEK30975.1 | SEL20000.1 | SAMN05216208_0239 | SAMN05216208_3096 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | (3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. | 0.924 |
SEK57186.1 | SEK30975.1 | SAMN05216208_1200 | SAMN05216208_0239 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.906 |
SEK57186.1 | SEL16423.1 | SAMN05216208_1200 | SAMN05216208_2959 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 3-methylfumaryl-CoA hydratase. | 0.537 |
SEK57186.1 | SEL20000.1 | SAMN05216208_1200 | SAMN05216208_3096 | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | (3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. | 0.924 |
SEL16413.1 | SEL16423.1 | SAMN05216208_2958 | SAMN05216208_2959 | Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 3-methylfumaryl-CoA hydratase. | 0.504 |
SEL16413.1 | SEL16455.1 | SAMN05216208_2958 | SAMN05216208_2960 | Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 2-methylcitrate dehydratase PrpD. | 0.504 |
SEL16413.1 | SEL16479.1 | SAMN05216208_2958 | SAMN05216208_2961 | Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | Acyl-CoA dehydrogenase. | 0.504 |
SEL16423.1 | SEK30975.1 | SAMN05216208_2959 | SAMN05216208_0239 | 3-methylfumaryl-CoA hydratase. | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.537 |
SEL16423.1 | SEK57186.1 | SAMN05216208_2959 | SAMN05216208_1200 | 3-methylfumaryl-CoA hydratase. | beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.537 |
SEL16423.1 | SEL16413.1 | SAMN05216208_2959 | SAMN05216208_2958 | 3-methylfumaryl-CoA hydratase. | Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.504 |
SEL16423.1 | SEL16455.1 | SAMN05216208_2959 | SAMN05216208_2960 | 3-methylfumaryl-CoA hydratase. | 2-methylcitrate dehydratase PrpD. | 0.977 |
SEL16423.1 | SEL16479.1 | SAMN05216208_2959 | SAMN05216208_2961 | 3-methylfumaryl-CoA hydratase. | Acyl-CoA dehydrogenase. | 0.907 |
SEL16423.1 | SEL16497.1 | SAMN05216208_2959 | SAMN05216208_2962 | 3-methylfumaryl-CoA hydratase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.618 |
SEL16423.1 | SEL16547.1 | SAMN05216208_2959 | SAMN05216208_2964 | 3-methylfumaryl-CoA hydratase. | Kynurenine formamidase. | 0.535 |
SEL16423.1 | SEL16777.1 | SAMN05216208_2959 | SAMN05216208_2973 | 3-methylfumaryl-CoA hydratase. | Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. | 0.626 |
SEL16423.1 | SEL16794.1 | SAMN05216208_2959 | SAMN05216208_2974 | 3-methylfumaryl-CoA hydratase. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.519 |
SEL16423.1 | SEL20000.1 | SAMN05216208_2959 | SAMN05216208_3096 | 3-methylfumaryl-CoA hydratase. | (3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. | 0.537 |
SEL16455.1 | SEL16413.1 | SAMN05216208_2960 | SAMN05216208_2958 | 2-methylcitrate dehydratase PrpD. | Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.504 |
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