Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK54517.1 | SEL17858.1 | SAMN05216208_1093 | SAMN05216208_3012 | Homoserine dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.680 |
SEK54517.1 | asd | SAMN05216208_1093 | SAMN05216208_1679 | Homoserine dehydrogenase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.986 |
SEK54517.1 | dapA | SAMN05216208_1093 | SAMN05216208_1666 | Homoserine dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.899 |
SEK54517.1 | dapB | SAMN05216208_1093 | SAMN05216208_2061 | Homoserine dehydrogenase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.665 |
SEK63914.1 | SEL17858.1 | SAMN05216208_1492 | SAMN05216208_3012 | Chorismate mutase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.499 |
SEK63914.1 | dapA | SAMN05216208_1492 | SAMN05216208_1666 | Chorismate mutase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.499 |
SEL17826.1 | SEL17858.1 | SAMN05216208_3011 | SAMN05216208_3012 | Transcriptional regulator, GntR family. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.675 |
SEL17858.1 | SEK54517.1 | SAMN05216208_3012 | SAMN05216208_1093 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Homoserine dehydrogenase. | 0.680 |
SEL17858.1 | SEK63914.1 | SAMN05216208_3012 | SAMN05216208_1492 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Chorismate mutase. | 0.499 |
SEL17858.1 | SEL17826.1 | SAMN05216208_3012 | SAMN05216208_3011 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Transcriptional regulator, GntR family. | 0.675 |
SEL17858.1 | SEL18044.1 | SAMN05216208_3012 | SAMN05216208_3019 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | D-amino-acid dehydrogenase. | 0.719 |
SEL17858.1 | SEL18088.1 | SAMN05216208_3012 | SAMN05216208_3021 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Predicted aconitase subunit 1. | 0.644 |
SEL17858.1 | SEL18117.1 | SAMN05216208_3012 | SAMN05216208_3022 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Proline racemase; Belongs to the proline racemase family. | 0.555 |
SEL17858.1 | asd | SAMN05216208_3012 | SAMN05216208_1679 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.794 |
SEL17858.1 | dapA | SAMN05216208_3012 | SAMN05216208_1666 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.575 |
SEL17858.1 | dapB | SAMN05216208_3012 | SAMN05216208_2061 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.835 |
SEL17858.1 | polA | SAMN05216208_3012 | SAMN05216208_3194 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.516 |
SEL18044.1 | SEL17858.1 | SAMN05216208_3019 | SAMN05216208_3012 | D-amino-acid dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.719 |
SEL18044.1 | SEL18088.1 | SAMN05216208_3019 | SAMN05216208_3021 | D-amino-acid dehydrogenase. | Predicted aconitase subunit 1. | 0.858 |
SEL18044.1 | SEL18117.1 | SAMN05216208_3019 | SAMN05216208_3022 | D-amino-acid dehydrogenase. | Proline racemase; Belongs to the proline racemase family. | 0.915 |
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