STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL17959.1Amino acid ABC transporter membrane protein 1, PAAT family. (221 aa)    
Predicted Functional Partners:
SEL18009.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.984
SEK59937.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.970
SEL17942.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.956
SEL17994.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 
 
0.945
SEK71791.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 
  0.919
SEK71765.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.918
SEK59882.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.917
SEK63032.1
L-glutamine ABC transporter ATP-binding protein.
  
  0.909
SEK62040.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.902
SEK33723.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.883
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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