STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL18896.1Fe-S-cluster-containing dehydrogenase component. (251 aa)    
Predicted Functional Partners:
SEL18848.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
SEL18928.1
DMSO reductase anchor subunit.
 
 
 0.997
SEL39134.1
trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.996
SEL24231.1
Sulfur dehydrogenase subunit SoxD.
   
 0.987
SEL24102.1
Monoheme cytochrome SoxX (sulfur oxidation).
  
 0.982
SEL24263.1
Cytochrome c.
  
 0.978
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.964
SEL20350.1
Nitric oxide reductase, NorC subunit apoprotein.
  
 0.952
SEL36313.1
Cytochrome c.
 
 
 0.949
SEL35018.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
 0.946
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.