Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK43523.1 | SEL02207.1 | SAMN05216208_0700 | SAMN05216208_2555 | Protein of unknown function. | Hypothetical protein. | 0.536 |
SEK43523.1 | SEL19802.1 | SAMN05216208_0700 | SAMN05216208_3087 | Protein of unknown function. | Uncharacterized conserved protein, MAPEG superfamily. | 0.472 |
SEK97721.1 | SEL19802.1 | SAMN05216208_2394 | SAMN05216208_3087 | Glutaredoxin. | Uncharacterized conserved protein, MAPEG superfamily. | 0.444 |
SEL02207.1 | SEK43523.1 | SAMN05216208_2555 | SAMN05216208_0700 | Hypothetical protein. | Protein of unknown function. | 0.536 |
SEL02207.1 | SEL18283.1 | SAMN05216208_2555 | SAMN05216208_3028 | Hypothetical protein. | Branched-chain amino acid transport protein. | 0.594 |
SEL02207.1 | SEL19802.1 | SAMN05216208_2555 | SAMN05216208_3087 | Hypothetical protein. | Uncharacterized conserved protein, MAPEG superfamily. | 0.480 |
SEL18283.1 | SEL02207.1 | SAMN05216208_3028 | SAMN05216208_2555 | Branched-chain amino acid transport protein. | Hypothetical protein. | 0.594 |
SEL18283.1 | SEL19802.1 | SAMN05216208_3028 | SAMN05216208_3087 | Branched-chain amino acid transport protein. | Uncharacterized conserved protein, MAPEG superfamily. | 0.522 |
SEL19775.1 | SEL19802.1 | SAMN05216208_3086 | SAMN05216208_3087 | Dihydrolipoamide dehydrogenase. | Uncharacterized conserved protein, MAPEG superfamily. | 0.663 |
SEL19775.1 | SEL19825.1 | SAMN05216208_3086 | SAMN05216208_3088 | Dihydrolipoamide dehydrogenase. | Hypothetical protein. | 0.504 |
SEL19775.1 | SEL19838.1 | SAMN05216208_3086 | SAMN05216208_3089 | Dihydrolipoamide dehydrogenase. | Hypothetical protein. | 0.420 |
SEL19775.1 | SEL19846.1 | SAMN05216208_3086 | SAMN05216208_3090 | Dihydrolipoamide dehydrogenase. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.996 |
SEL19775.1 | SEL19875.1 | SAMN05216208_3086 | SAMN05216208_3091 | Dihydrolipoamide dehydrogenase. | 2-oxoglutarate dehydrogenase E1 component. | 0.991 |
SEL19775.1 | sucD-2 | SAMN05216208_3086 | SAMN05216208_3092 | Dihydrolipoamide dehydrogenase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.419 |
SEL19802.1 | SEK43523.1 | SAMN05216208_3087 | SAMN05216208_0700 | Uncharacterized conserved protein, MAPEG superfamily. | Protein of unknown function. | 0.472 |
SEL19802.1 | SEK97721.1 | SAMN05216208_3087 | SAMN05216208_2394 | Uncharacterized conserved protein, MAPEG superfamily. | Glutaredoxin. | 0.444 |
SEL19802.1 | SEL02207.1 | SAMN05216208_3087 | SAMN05216208_2555 | Uncharacterized conserved protein, MAPEG superfamily. | Hypothetical protein. | 0.480 |
SEL19802.1 | SEL18283.1 | SAMN05216208_3087 | SAMN05216208_3028 | Uncharacterized conserved protein, MAPEG superfamily. | Branched-chain amino acid transport protein. | 0.522 |
SEL19802.1 | SEL19775.1 | SAMN05216208_3087 | SAMN05216208_3086 | Uncharacterized conserved protein, MAPEG superfamily. | Dihydrolipoamide dehydrogenase. | 0.663 |
SEL19802.1 | SEL19825.1 | SAMN05216208_3087 | SAMN05216208_3088 | Uncharacterized conserved protein, MAPEG superfamily. | Hypothetical protein. | 0.804 |
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