STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL20280.1Pseudoazurin. (143 aa)    
Predicted Functional Partners:
SEL20253.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; Belongs to the multicopper oxidase family.
 
 
 0.992
SEK48313.1
Hypothetical protein.
   
   0.929
SEK65445.1
Copper-resistance protein, CopA family.
   
 0.926
SEL20301.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
   
 0.867
SEL20233.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.860
SEL20329.1
Hybrid cluster protein-associated redox disulfide domain-containing protein.
  
     0.739
SEK48291.1
Hypothetical protein.
   
 0.725
SEL20442.1
Hypothetical protein.
  
     0.706
SEL13967.1
Tyrosine phosphatase family protein.
   
 
 0.615
SEK98970.1
NADH dehydrogenase subunit M.
    
   0.589
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.