STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL24078.1Thioredoxin-like domain-containing protein. (190 aa)    
Predicted Functional Partners:
SEL24102.1
Monoheme cytochrome SoxX (sulfur oxidation).
 
     0.932
SEL24035.1
Hypothetical protein.
 
     0.931
SEL24126.1
Sulfur-oxidizing protein SoxY.
 
   
 0.907
SEL24147.1
Sulfur-oxidizing protein SoxZ.
 
     0.898
SEL24167.1
Sulfur-oxidizing protein SoxA.
 
     0.886
SEL23996.1
Hypothetical protein.
 
     0.847
SEL24062.1
Cytochrome c-type biogenesis protein.
 
   
 0.844
SEL24191.1
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
     0.837
SEL24231.1
Sulfur dehydrogenase subunit SoxD.
 
     0.832
SEL24215.1
Sulfur dehydrogenase subunit SoxC.
 
     0.811
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.