STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL26479.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
SEL26450.1
Rod binding protein; Manually curated.
 
     0.945
SEL26889.1
Hypothetical protein.
  
     0.746
SEL26413.1
Hook-length control protein FliK.
 
     0.711
SEK93965.1
Cro/C1-type HTH DNA-binding domain-containing protein.
  
     0.662
SEL26397.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
       0.634
SEK98799.1
Glycosyl transferase family 2.
  
     0.579
SEL26538.1
Flagellar protein FlaF.
 
     0.568
SEL26513.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
     0.556
SEL26574.1
Flagellar protein FlbT.
 
     0.507
SEK30365.1
Hypothetical protein.
  
     0.500
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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