Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK30365.1 | SEK93965.1 | SAMN05216208_0217 | SAMN05216208_2241 | Hypothetical protein. | Cro/C1-type HTH DNA-binding domain-containing protein. | 0.773 |
SEK30365.1 | SEK98799.1 | SAMN05216208_0217 | SAMN05216208_2432 | Hypothetical protein. | Glycosyl transferase family 2. | 0.669 |
SEK30365.1 | SEL26479.1 | SAMN05216208_0217 | SAMN05216208_3262 | Hypothetical protein. | Hypothetical protein. | 0.500 |
SEK93965.1 | SEK30365.1 | SAMN05216208_2241 | SAMN05216208_0217 | Cro/C1-type HTH DNA-binding domain-containing protein. | Hypothetical protein. | 0.773 |
SEK93965.1 | SEK98799.1 | SAMN05216208_2241 | SAMN05216208_2432 | Cro/C1-type HTH DNA-binding domain-containing protein. | Glycosyl transferase family 2. | 0.738 |
SEK93965.1 | SEL26479.1 | SAMN05216208_2241 | SAMN05216208_3262 | Cro/C1-type HTH DNA-binding domain-containing protein. | Hypothetical protein. | 0.662 |
SEK98799.1 | SEK30365.1 | SAMN05216208_2432 | SAMN05216208_0217 | Glycosyl transferase family 2. | Hypothetical protein. | 0.669 |
SEK98799.1 | SEK93965.1 | SAMN05216208_2432 | SAMN05216208_2241 | Glycosyl transferase family 2. | Cro/C1-type HTH DNA-binding domain-containing protein. | 0.738 |
SEK98799.1 | SEL26479.1 | SAMN05216208_2432 | SAMN05216208_3262 | Glycosyl transferase family 2. | Hypothetical protein. | 0.579 |
SEL26397.1 | SEL26413.1 | SAMN05216208_3259 | SAMN05216208_3260 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Hook-length control protein FliK. | 0.997 |
SEL26397.1 | SEL26450.1 | SAMN05216208_3259 | SAMN05216208_3261 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Rod binding protein; Manually curated. | 0.990 |
SEL26397.1 | SEL26479.1 | SAMN05216208_3259 | SAMN05216208_3262 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Hypothetical protein. | 0.634 |
SEL26397.1 | SEL26513.1 | SAMN05216208_3259 | SAMN05216208_3263 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.962 |
SEL26397.1 | SEL26538.1 | SAMN05216208_3259 | SAMN05216208_3264 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar protein FlaF. | 0.509 |
SEL26397.1 | SEL26574.1 | SAMN05216208_3259 | SAMN05216208_3265 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar protein FlbT. | 0.576 |
SEL26413.1 | SEL26397.1 | SAMN05216208_3260 | SAMN05216208_3259 | Hook-length control protein FliK. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.997 |
SEL26413.1 | SEL26450.1 | SAMN05216208_3260 | SAMN05216208_3261 | Hook-length control protein FliK. | Rod binding protein; Manually curated. | 0.992 |
SEL26413.1 | SEL26479.1 | SAMN05216208_3260 | SAMN05216208_3262 | Hook-length control protein FliK. | Hypothetical protein. | 0.711 |
SEL26413.1 | SEL26513.1 | SAMN05216208_3260 | SAMN05216208_3263 | Hook-length control protein FliK. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.896 |
SEL26413.1 | SEL26538.1 | SAMN05216208_3260 | SAMN05216208_3264 | Hook-length control protein FliK. | Flagellar protein FlaF. | 0.694 |
page 1 of 3