Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL32203.1 | SEL32216.1 | SAMN05216208_3441 | SAMN05216208_3442 | Chloramphenicol-sensitive protein RarD. | Protein required for attachment to host cells. | 0.600 |
SEL32203.1 | SEL32247.1 | SAMN05216208_3441 | SAMN05216208_3443 | Chloramphenicol-sensitive protein RarD. | Hypothetical protein. | 0.526 |
SEL32203.1 | SEL32278.1 | SAMN05216208_3441 | SAMN05216208_3444 | Chloramphenicol-sensitive protein RarD. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.525 |
SEL32216.1 | SEL32203.1 | SAMN05216208_3442 | SAMN05216208_3441 | Protein required for attachment to host cells. | Chloramphenicol-sensitive protein RarD. | 0.600 |
SEL32216.1 | SEL32247.1 | SAMN05216208_3442 | SAMN05216208_3443 | Protein required for attachment to host cells. | Hypothetical protein. | 0.955 |
SEL32216.1 | SEL32278.1 | SAMN05216208_3442 | SAMN05216208_3444 | Protein required for attachment to host cells. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.627 |
SEL32247.1 | SEL32203.1 | SAMN05216208_3443 | SAMN05216208_3441 | Hypothetical protein. | Chloramphenicol-sensitive protein RarD. | 0.526 |
SEL32247.1 | SEL32216.1 | SAMN05216208_3443 | SAMN05216208_3442 | Hypothetical protein. | Protein required for attachment to host cells. | 0.955 |
SEL32247.1 | SEL32278.1 | SAMN05216208_3443 | SAMN05216208_3444 | Hypothetical protein. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.540 |
SEL32278.1 | SEL32203.1 | SAMN05216208_3444 | SAMN05216208_3441 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Chloramphenicol-sensitive protein RarD. | 0.525 |
SEL32278.1 | SEL32216.1 | SAMN05216208_3444 | SAMN05216208_3442 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Protein required for attachment to host cells. | 0.627 |
SEL32278.1 | SEL32247.1 | SAMN05216208_3444 | SAMN05216208_3443 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Hypothetical protein. | 0.540 |